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| abo.w | .. data name ... |
| normalize.qnt.add | Add-on quantile normalization |
| normalize.qnt.val | Quantile normalization |
| normalize.vsn.add | Variance stabilizing add-on normalization |
| pamr.fil | .. title |
| summarize.add | Add-on probeset summary |
| summarize.val | Probeset summary |
| vsn.newpars | New variance stabilizing transformation parameters |
| wrap.val | Wrapper for preprocessing, documented "by value" |
| wrap.val.add | Wrapper for add-on preprocessing |