Source Name	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [Sex]	Term Source REF	Term Accession Number	Characteristics [Stage]	Characteristics [age.at.operation]	Characteristics [capsular.effraction.lnm]	Characteristics [extrathyroidal.extension..where]	Characteristics [histological..subtype]	Characteristics [largest.dimension..primary.tumor..cm.]	Characteristics [largest.dimension.ln.metastasis..cm.]	Characteristics [lymphocyte.reaction]	Characteristics [multifocal]	Characteristics [mutational.status]	Characteristics [n0]	Characteristics [number.of.invaded.lymph.nodes..on.total.investigated.lymph.nodes]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [rqi]	Characteristics [tnm]	Characteristics [tumor.in.left.right.lobe]	Term Source REF	Term Accession Number	Characteristics [vascular.invasion]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [Sex]	Term Source REF	Term Accession Number	FactorValue [Stage]	FactorValue [age.at.operation]	FactorValue [capsular.effraction.lnm]	FactorValue [extrathyroidal.extension..where]	FactorValue [histological..subtype]	FactorValue [largest.dimension..primary.tumor..cm.]	FactorValue [largest.dimension.ln.metastasis..cm.]	FactorValue [lymphocyte.reaction]	FactorValue [multifocal]	FactorValue [mutational.status]	FactorValue [n0]	FactorValue [number.of.invaded.lymph.nodes..on.total.investigated.lymph.nodes]	FactorValue [rqi]	FactorValue [tnm]	FactorValue [tumor.in.left.right.lobe]	Term Source REF	Term Accession Number	FactorValue [vascular.invasion]
GSM1481929 1	15-PT-N1,Papillary thyroid carcinoma,N1	15-PT-N1,Papillary thyroid carcinoma,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	34.0	no	yes	Follicular	1.2	0.7	yes	no	RET-PTC1	N1	8 on 41	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	7.9	pT3N1bMx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481929 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481929 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481929	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481929_PTC67_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481929_sample_table.txt norm	GSM1481929_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	34.0	no	yes	Follicular	1.2	0.7	yes	no	RET-PTC1	N1	8 on 41	7.9	pT3N1bMx	right	EFO	EFO_0001659	no
GSM1481928 1	15-LNM2,Lymph node metastasis,N1	15-LNM2,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	34.0	no	yes	Follicular	1.2	0.7	yes	no	RET-PTC1	N1	8 on 41	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.9	pT3N1bMx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481928 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481928 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481928	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481928_PTC67M2_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481928_sample_table.txt norm	GSM1481928_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	34.0	no	yes	Follicular	1.2	0.7	yes	no	RET-PTC1	N1	8 on 41	8.9	pT3N1bMx	right	EFO	EFO_0001659	no
GSM1481927 1	15-LNM1,Lymph node metastasis,N1	15-LNM1,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	34.0	no	yes	Follicular	1.2	0.7	yes	no	RET-PTC1	N1	8 on 41	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.3	pT3N1bMx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481927 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481927 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481927	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481927_PTC67M1_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481927_sample_table.txt norm	GSM1481927_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	34.0	no	yes	Follicular	1.2	0.7	yes	no	RET-PTC1	N1	8 on 41	9.3	pT3N1bMx	right	EFO	EFO_0001659	no
GSM1481926 1	14-PT-N1,Papillary thyroid carcinoma,N1	14-PT-N1,Papillary thyroid carcinoma,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	36.0	yes	yes	Diffuse sclerosis	3.0	1.0	yes	yes	BRAFmut	N1	28 on 64	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.1	pT3(m)N1bMx	both	  	  	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481926 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481926 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481926	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481926_PTC66_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481926_sample_table.txt norm	GSM1481926_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	36.0	yes	yes	Diffuse sclerosis	3.0	1.0	yes	yes	BRAFmut	N1	28 on 64	9.1	pT3(m)N1bMx	both	  	  	yes
GSM1481925 1	14-LNM,Lymph node metastasis,N1	14-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	36.0	yes	yes	Diffuse sclerosis	3.0	1.0	yes	yes	BRAFmut	N1	28 on 64	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.9	pT3(m)N1bMx	both	  	  	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481925 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481925 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481925	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481925_PTC66M_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481925_sample_table.txt norm	GSM1481925_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	36.0	yes	yes	Diffuse sclerosis	3.0	1.0	yes	yes	BRAFmut	N1	28 on 64	8.9	pT3(m)N1bMx	both	  	  	yes
GSM1481924 1	31-PT-N0,Papillary thyroid carcinoma,N0	31-PT-N0,Papillary thyroid carcinoma,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	NA	59.0	NA	no	Papillary	0.9	NA	yes	no	not_available_yet	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.8	N0	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481924 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481924 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481924	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481924_PTC65_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481924_sample_table.txt norm	GSM1481924_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	NA	59.0	NA	no	Papillary	0.9	NA	yes	no	not_available_yet	N0	NA	8.8	N0	left	EFO	EFO_0001658	no
GSM1481923 1	30-PT-N0,Papillary thyroid carcinoma,N0	30-PT-N0,Papillary thyroid carcinoma,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	47.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.4	pT3N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481923 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481923 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481923	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481923_PTC63_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481923_sample_table.txt norm	GSM1481923_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	47.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	9.4	pT3N0Mx	left	EFO	EFO_0001658	no
GSM1481922 1	15-N,Normal thyroid,N1	15-N,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	34.0	no	yes	Follicular	1.2	0.7	yes	no	RET-PTC1	N1	8 on 41	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.8	pT3N1bMx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481922 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481922 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481922	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481922_NPTC67_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481922_sample_table.txt norm	GSM1481922_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	34.0	no	yes	Follicular	1.2	0.7	yes	no	RET-PTC1	N1	8 on 41	8.8	pT3N1bMx	right	EFO	EFO_0001659	no
GSM1481921 1	14-N,Normal thyroid,N1	14-N,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	36.0	yes	yes	Diffuse sclerosis	3.0	1.0	yes	yes	BRAFmut	N1	28 on 64	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.9	pT3(m)N1bMx	both	  	  	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481921 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481921 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481921	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481921_NPTC66_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481921_sample_table.txt norm	GSM1481921_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	36.0	yes	yes	Diffuse sclerosis	3.0	1.0	yes	yes	BRAFmut	N1	28 on 64	8.9	pT3(m)N1bMx	both	  	  	yes
GSM1481920 1	31-N,Normal thyroid,N0	31-N,Normal thyroid,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	NA	59.0	NA	no	Papillary	0.9	NA	yes	no	not_available_yet	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	7.8	N0	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481920 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481920 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481920	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481920_NPTC65_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481920_sample_table.txt norm	GSM1481920_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	NA	59.0	NA	no	Papillary	0.9	NA	yes	no	not_available_yet	N0	NA	7.8	N0	left	EFO	EFO_0001658	no
GSM1481919 1	30-N,Normal thyroid,N0	30-N,Normal thyroid,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	47.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.5	pT3N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481919 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481919 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481919	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481919_NPTC63_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481919_sample_table.txt norm	GSM1481919_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	47.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	8.5	pT3N0Mx	left	EFO	EFO_0001658	no
GSM1481918 1	17-N,Normal thyroid,N1	17-N,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	65.0	yes	yes	Papillary	1.0	0.8	no	yes	BRAFmut	N1	1 on 6	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3mN1aMx	both	  	  	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481918 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481918 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481918	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481918_9-52-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481918_sample_table.txt norm	GSM1481918_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	65.0	yes	yes	Papillary	1.0	0.8	no	yes	BRAFmut	N1	1 on 6	NA	pT3mN1aMx	both	  	  	yes
GSM1481917 1	22a-PT-N0,Papillary thyroid carcinoma,N0	22a-PT-N0,Papillary thyroid carcinoma,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	2.0	NA	yes	yes	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.7	pT3(m)N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481917 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481917 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481917	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481917_9-21PTCPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481917_sample_table.txt norm	GSM1481917_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	2.0	NA	yes	yes	BRAFmut	N0	NA	8.7	pT3(m)N0Mx	right	EFO	EFO_0001659	no
GSM1481916 1	24-N,Normal thyroid,N0	24-N,Normal thyroid,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	29.0	NA	no	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.4	pT1N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481916 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481916 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481916	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481916_9-12NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481916_sample_table.txt norm	GSM1481916_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	29.0	NA	no	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	8.4	pT1N0Mx	left	EFO	EFO_0001658	no
GSM1481915 1	17-PT-N1,Papillary thyroid carcinoma,N1	17-PT-N1,Papillary thyroid carcinoma,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	65.0	yes	yes	Papillary	1.0	0.8	no	yes	BRAFmut	N1	1 on 6	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3mN1aMx	both	  	  	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481915 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481915 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481915	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481915_8-53-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481915_sample_table.txt norm	GSM1481915_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	65.0	yes	yes	Papillary	1.0	0.8	no	yes	BRAFmut	N1	1 on 6	NA	pT3mN1aMx	both	  	  	yes
GSM1481914 1	9-PT-N1,Papillary thyroid carcinoma,N1	9-PT-N1,Papillary thyroid carcinoma,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	43.0	yes	no	Papillary	1.5	2.0	no	no	NA	N1	4 on 22	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.1	pT1N1bMx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481914 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481914 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481914	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481914_8-3PTPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481914_sample_table.txt norm	GSM1481914_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	43.0	yes	no	Papillary	1.5	2.0	no	no	NA	N1	4 on 22	8.1	pT1N1bMx	right	EFO	EFO_0001659	no
GSM1481913 1	22a-N,Normal thyroid,N0	22a-N,Normal thyroid,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	2.0	NA	yes	yes	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.4	pT3(m)N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481913 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481913 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481913	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481913_8-21NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481913_sample_table.txt norm	GSM1481913_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	2.0	NA	yes	yes	BRAFmut	N0	NA	8.4	pT3(m)N0Mx	right	EFO	EFO_0001659	no
GSM1481912 1	23-PT-N0,Papillary thyroid carcinoma,N0	23-PT-N0,Papillary thyroid carcinoma,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	52.0	NA	yes	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.6	pT3N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481912 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481912 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481912	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481912_8-11PTCPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481912_sample_table.txt norm	GSM1481912_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	52.0	NA	yes	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	8.6	pT3N0Mx	right	EFO	EFO_0001659	no
GSM1481911 1	9-N,Normal thyroid,N1	9-N,Normal thyroid,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	43.0	yes	no	Papillary	1.5	2.0	no	no	NA	N1	4 on 22	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.0	pT1N1bMx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481911 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481911 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481911	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481911_7-3NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481911_sample_table.txt norm	GSM1481911_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	43.0	yes	no	Papillary	1.5	2.0	no	no	NA	N1	4 on 22	9.0	pT1N1bMx	right	EFO	EFO_0001659	no
GSM1481910 1	21a-PT-N0,Papillary thyroid carcinoma,N0	21a-PT-N0,Papillary thyroid carcinoma,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	46.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	7.9	pT3N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481910 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481910 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481910	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481910_7-17PTCPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481910_sample_table.txt norm	GSM1481910_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	46.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	7.9	pT3N0Mx	left	EFO	EFO_0001658	no
GSM1481909 1	18-LNM,Lymph node metastasis,N1	18-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	12.5	yes	yes	Papillary	5.0	2.2	no	no	BRAFmut	N1	6 on 14	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3N1bMx	left	EFO	EFO_0001658	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481909 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481909 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481909	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481909_6-47-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481909_sample_table.txt norm	GSM1481909_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	12.5	yes	yes	Papillary	5.0	2.2	no	no	BRAFmut	N1	6 on 14	NA	pT3N1bMx	left	EFO	EFO_0001658	yes
GSM1481908 1	8-LNM,Lymph node metastasis,N1	8-LNM,Lymph node metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	33.0	yes	yes	Papillary	1.5	5.5	no	yes	BRAFmut	N1	8 on 52	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.1	pT3(m)N1aMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481908 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481908 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481908	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481908_6-2MPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.1.zip	P-GSE60542-1	ArrayExpress	GSM1481908_sample_table.txt norm	GSM1481908_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	33.0	yes	yes	Papillary	1.5	5.5	no	yes	BRAFmut	N1	8 on 52	8.1	pT3(m)N1aMx	both	  	  	no
GSM1481907 1	21a-N,Normal thyroid,N0	21a-N,Normal thyroid,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	46.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.9	pT3N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481907 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481907 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481907	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481907_6-17NPS.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481907_sample_table.txt norm	GSM1481907_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	46.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	8.9	pT3N0Mx	left	EFO	EFO_0001658	no
GSM1481906 1	22-PT-N0,Papillary thyroid carcinoma,N0	22-PT-N0,Papillary thyroid carcinoma,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	2.0	NA	yes	yes	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.0	pT3(m)N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481906 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481906 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481906	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481906_6-10PTCPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481906_sample_table.txt norm	GSM1481906_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	2.0	NA	yes	yes	BRAFmut	N0	NA	9.0	pT3(m)N0Mx	right	EFO	EFO_0001659	no
GSM1481905 1	11a-PT-N1,Papillary thyroid carcinoma,N1	11a-PT-N1,Papillary thyroid carcinoma,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	42.0	yes	yes	Papillary	3.0	1.0	yes	yes	BRAFmut	N1	22 on 51	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.4	pT3(m)N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481905 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481905 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481905	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481905_5PTPS_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481905_sample_table.txt norm	GSM1481905_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	42.0	yes	yes	Papillary	3.0	1.0	yes	yes	BRAFmut	N1	22 on 51	9.4	pT3(m)N1bMx	both	  	  	no
GSM1481904 1	18-N,Normal thyroid,N1	18-N,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	12.5	yes	yes	Papillary	5.0	2.2	no	no	BRAFmut	N1	6 on 14	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3N1bMx	left	EFO	EFO_0001658	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481904 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481904 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481904	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481904_5-49-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481904_sample_table.txt norm	GSM1481904_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	12.5	yes	yes	Papillary	5.0	2.2	no	no	BRAFmut	N1	6 on 14	NA	pT3N1bMx	left	EFO	EFO_0001658	yes
GSM1481903 1	8-PT-N1,Papillary thyroid carcinoma,N1	8-PT-N1,Papillary thyroid carcinoma,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	33.0	yes	yes	Papillary	1.5	5.5	no	yes	BRAFmut	N1	8 on 52	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.7	pT3(m)N1aMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481903 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481903 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481903	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481903_5-2PTPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481903_sample_table.txt norm	GSM1481903_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	33.0	yes	yes	Papillary	1.5	5.5	no	yes	BRAFmut	N1	8 on 52	8.7	pT3(m)N1aMx	both	  	  	no
GSM1481902 1	27-PT-N0,Papillary thyroid carcinoma,N0	27-PT-N0,Papillary thyroid carcinoma,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	44.0	NA	no	Follicular	4.0	NA	no	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.0	pT2N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481902 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481902 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481902	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481902_5-15PTCPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481902_sample_table.txt norm	GSM1481902_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	44.0	NA	no	Follicular	4.0	NA	no	no	BRAFmut	N0	NA	9.0	pT2N0Mx	left	EFO	EFO_0001658	no
GSM1481901 1	22-N,Normal thyroid,N0	22-N,Normal thyroid,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	2.0	NA	yes	yes	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	7.0	pT3(m)N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481901 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481901 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481901	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481901_5-10NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481901_sample_table.txt norm	GSM1481901_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	2.0	NA	yes	yes	BRAFmut	N0	NA	7.0	pT3(m)N0Mx	right	EFO	EFO_0001659	no
GSM1481900 1	5-N,Normal thyroid,N1	5-N,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	39.0	no	no	Follicular	NA	3.0	no	no	NA	N1	6 on 14	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3N1bMx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481900 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481900 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481900	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481900_41-82BOPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481900_sample_table.txt norm	GSM1481900_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	39.0	no	no	Follicular	NA	3.0	no	no	NA	N1	6 on 14	NA	pT3N1bMx	left	EFO	EFO_0001658	no
GSM1481899 1	4-R,Recurrence,N1	4-R,Recurrence,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	73.0	yes	yes	Papillary	NA	5.0	no	no	BRAFmut	N1	9 on 27	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT4aN1bMx	left	EFO	EFO_0001658	NA	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481899 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481899 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481899	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481899_40-91BOPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481899_sample_table.txt norm	GSM1481899_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	73.0	yes	yes	Papillary	NA	5.0	no	no	BRAFmut	N1	9 on 27	NA	pT4aN1bMx	left	EFO	EFO_0001658	NA
GSM1481898 1	21-PT-N0,Papillary thyroid carcinoma,N0	21-PT-N0,Papillary thyroid carcinoma,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	46.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.1	pT3N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481898 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481898 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481898	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481898_4-6PTCPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481898_sample_table.txt norm	GSM1481898_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	46.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	8.1	pT3N0Mx	left	EFO	EFO_0001658	no
GSM1481897 1	2-NLN,Normal lymph node,N1	2-NLN,Normal lymph node,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	59.0	no	no	Papillary	1.6	NA	yes	no	NA	N1	5 on 7	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT1N1Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481897 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481897 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481897	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481897_4-46-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481897_sample_table.txt norm	GSM1481897_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	59.0	no	no	Papillary	1.6	NA	yes	no	NA	N1	5 on 7	NA	pT1N1Mx	right	EFO	EFO_0001659	no
GSM1481896 1	8-N,Normal thyroid,N1	8-N,Normal thyroid,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	33.0	yes	yes	Papillary	1.5	5.5	no	yes	BRAFmut	N1	8 on 52	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	7.5	pT3(m)N1aMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481896 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481896 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481896	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481896_4-2NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481896_sample_table.txt norm	GSM1481896_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	33.0	yes	yes	Papillary	1.5	5.5	no	yes	BRAFmut	N1	8 on 52	7.5	pT3(m)N1aMx	both	  	  	no
GSM1481895 1	27-N,Normal thyroid,N0	27-N,Normal thyroid,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	44.0	NA	no	Follicular	4.0	NA	no	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.8	pT2N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481895 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481895 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481895	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481895_4-15NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481895_sample_table.txt norm	GSM1481895_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	44.0	NA	no	Follicular	4.0	NA	no	no	BRAFmut	N0	NA	8.8	pT2N0Mx	left	EFO	EFO_0001658	no
GSM1481894 1	4-N,Normal thyroid,N1	4-N,Normal thyroid,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	73.0	yes	yes	Papillary	NA	5.0	no	no	BRAFmut	N1	15 on 22	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT4aN1bMx	left	EFO	EFO_0001658	NA	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481894 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481894 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481894	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481894_39-75-BOPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481894_sample_table.txt norm	GSM1481894_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	73.0	yes	yes	Papillary	NA	5.0	no	no	BRAFmut	N1	15 on 22	NA	pT4aN1bMx	left	EFO	EFO_0001658	NA
GSM1481893 1	3-N,Normal thyroid,N1	3-N,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	25.0	yes	no	Papillary	2.5	2.2	no	yes	BRAFmut	N1	5 on 23	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT2(m)N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481893 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481893 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481893	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481893_38-73-BOPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481893_sample_table.txt norm	GSM1481893_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	25.0	yes	no	Papillary	2.5	2.2	no	yes	BRAFmut	N1	5 on 23	NA	pT2(m)N1bMx	both	  	  	no
GSM1481892 1	2-LNM,Lymph node metastasis,N1	2-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	59.0	no	no	Papillary	1.6	NA	yes	no	NA	N1	5 on 7	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.3	pT1N1Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481892 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481892 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481892	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481892_37-46-BObisPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481892_sample_table.txt norm	GSM1481892_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	59.0	no	no	Papillary	1.6	NA	yes	no	NA	N1	5 on 7	9.3	pT1N1Mx	right	EFO	EFO_0001659	no
GSM1481891 1	21-N,Normal thyroid,N0	21-N,Normal thyroid,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	46.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.2	pT3N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481891 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481891 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481891	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481891_3-6NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481891_sample_table.txt norm	GSM1481891_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	46.0	NA	yes	Papillary	2.5	NA	yes	no	BRAFmut	N0	NA	9.2	pT3N0Mx	left	EFO	EFO_0001658	no
GSM1481890 1	2-PT-N1,Papillary thyroid carcinoma,N1	2-PT-N1,Papillary thyroid carcinoma,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	59.0	no	no	Papillary	1.6	NA	yes	no	NA	N1	5 on 7	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT1N1Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481890 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481890 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481890	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481890_3-45-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.2.zip	P-GSE60542-1	ArrayExpress	GSM1481890_sample_table.txt norm	GSM1481890_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	59.0	no	no	Papillary	1.6	NA	yes	no	NA	N1	5 on 7	NA	pT1N1Mx	right	EFO	EFO_0001659	no
GSM1481889 1	7-PT-N1,Papillary thyroid carcinoma,N1	7-PT-N1,Papillary thyroid carcinoma,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	14.0	no	yes	Papillary	1.6	NA	no	yes	NA	N1	3 on 41	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.5	pT3(m)N1aMx	left	EFO	EFO_0001658	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481889 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481889 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481889	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481889_3-1PTPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481889_sample_table.txt norm	GSM1481889_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	14.0	no	yes	Papillary	1.6	NA	no	yes	NA	N1	3 on 41	8.5	pT3(m)N1aMx	left	EFO	EFO_0001658	yes
GSM1481888 1	26-PT-N0,Papillary thyroid carcinoma,N0	26-PT-N0,Papillary thyroid carcinoma,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	1.0	NA	yes	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.7	pT3N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481888 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481888 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481888	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481888_3-14PTCPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481888_sample_table.txt norm	GSM1481888_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	1.0	NA	yes	no	BRAFmut	N0	NA	8.7	pT3N0Mx	right	EFO	EFO_0001659	no
GSM1481887 1	16-PLM,Pleural metastasis,N1	16-PLM,Pleural metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVC	71.0	yes	yes	poorly differentiated with well differentiated PTC compatible areas	4.0	4.5	no	no	NRAS	N1	8 on 25	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.0	pT4aN1bM1	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481887 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481887 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481887	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481887_224Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481887_sample_table.txt norm	GSM1481887_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVC	71.0	yes	yes	poorly differentiated with well differentiated PTC compatible areas	4.0	4.5	no	no	NRAS	N1	8 on 25	9.0	pT4aN1bM1	right	EFO	EFO_0001659	no
GSM1481886 1	16-LNM2,Lymph node metastasis,N1	16-LNM2,Lymph node metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVC	71.0	yes	yes	poorly differentiated with well differentiated PTC compatible areas	4.0	4.5	no	no	NRAS	N1	8 on 25	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.4	pT4aN1bM1	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481886 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481886 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481886	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481886_223Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481886_sample_table.txt norm	GSM1481886_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVC	71.0	yes	yes	poorly differentiated with well differentiated PTC compatible areas	4.0	4.5	no	no	NRAS	N1	8 on 25	8.4	pT4aN1bM1	right	EFO	EFO_0001659	no
GSM1481885 1	16-LNM1,Lymph node metastasis,N1	16-LNM1,Lymph node metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVC	71.0	yes	yes	poorly differentiated with well differentiated PTC compatible areas	4.0	4.5	no	no	NRAS	N1	8 on 25	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.0	pT4aN1bM1	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481885 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481885 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481885	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481885_220Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481885_sample_table.txt norm	GSM1481885_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVC	71.0	yes	yes	poorly differentiated with well differentiated PTC compatible areas	4.0	4.5	no	no	NRAS	N1	8 on 25	9.0	pT4aN1bM1	right	EFO	EFO_0001659	no
GSM1481884 1	6-LNM,Lymph node metastasis,N1	6-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	38.0	NA	NA	Tubulair	2.3	1.7	yes	no	BRAFmut	N1	7 on 13	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	PT3N1aMx	NA	  	  	NA	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481884 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481884 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481884	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481884_22-1067-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481884_sample_table.txt norm	GSM1481884_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	38.0	NA	NA	Tubulair	2.3	1.7	yes	no	BRAFmut	N1	7 on 13	NA	PT3N1aMx	NA	  	  	NA
GSM1481883 1	16-PT-N1,Papillary thyroid carcinoma,N1	16-PT-N1,Papillary thyroid carcinoma,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVC	71.0	yes	yes	poorly differentiated with well differentiated PTC compatible areas	4.0	4.5	no	no	NRAS	N1	8 on 25	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.2	pT4aN1bM1	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481883 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481883 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481883	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481883_218Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481883_sample_table.txt norm	GSM1481883_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVC	71.0	yes	yes	poorly differentiated with well differentiated PTC compatible areas	4.0	4.5	no	no	NRAS	N1	8 on 25	9.2	pT4aN1bM1	right	EFO	EFO_0001659	no
GSM1481882 1	6-PT-N1,Papillary thyroid carcinoma,N1	6-PT-N1,Papillary thyroid carcinoma,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	38.0	NA	NA	Tubulair	2.3	1.7	yes	no	BRAFmut	N1	7 on 13	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	PT3N1aMx	NA	  	  	NA	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481882 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481882 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481882	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481882_21-PTC9-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481882_sample_table.txt norm	GSM1481882_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	38.0	NA	NA	Tubulair	2.3	1.7	yes	no	BRAFmut	N1	7 on 13	NA	PT3N1aMx	NA	  	  	NA
GSM1481881 1	5-LNM,Lymph node metastasis,N1	5-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	39.0	no	no	Follicular	NA	3.0	no	no	NA	N1	6 on 14	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3N1bMx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481881 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481881 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481881	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481881_20-83-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481881_sample_table.txt norm	GSM1481881_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	39.0	no	no	Follicular	NA	3.0	no	no	NA	N1	6 on 14	NA	pT3N1bMx	left	EFO	EFO_0001658	no
GSM1481880 1	11-N,Normal thyroid,N1	11-N,Normal thyroid,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	42.0	yes	yes	Papillary	3.0	1.0	yes	yes	BRAFmut	N1	22 on 51	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	7.9	pT3(m)N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481880 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481880 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481880	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481880_2-5NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481880_sample_table.txt norm	GSM1481880_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	42.0	yes	yes	Papillary	3.0	1.0	yes	yes	BRAFmut	N1	22 on 51	7.9	pT3(m)N1bMx	both	  	  	no
GSM1481879 1	7-LNM,Lymph node metastasis,N1	7-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	14.0	no	yes	Papillary	1.6	NA	no	yes	NA	N1	3 on 41	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.6	pT3(m)N1aMx	left	EFO	EFO_0001658	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481879 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481879 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481879	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481879_2-1MPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481879_sample_table.txt norm	GSM1481879_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	14.0	no	yes	Papillary	1.6	NA	no	yes	NA	N1	3 on 41	8.6	pT3(m)N1aMx	left	EFO	EFO_0001658	yes
GSM1481878 1	1-LNM,Lymph node metastasis,N1	1-LNM,Lymph node metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	35.0	yes	no	Papillary	5.0	4.0	no	no	RET-PTC1	N1	8 on 8	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3N1bMx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481878 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481878 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481878	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481878_2-18a-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481878_sample_table.txt norm	GSM1481878_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	35.0	yes	no	Papillary	5.0	4.0	no	no	RET-PTC1	N1	8 on 8	NA	pT3N1bMx	left	EFO	EFO_0001658	no
GSM1481877 1	26-N,Normal thyroid,N0	26-N,Normal thyroid,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	1.0	NA	yes	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.2	pT3N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481877 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481877 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481877	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481877_2-14NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481877_sample_table.txt norm	GSM1481877_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	III	50.0	NA	yes	Papillary	1.0	NA	yes	no	BRAFmut	N0	NA	8.2	pT3N0Mx	right	EFO	EFO_0001659	no
GSM1481876 1	7-N,Normal thyroid,N1	7-N,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	14.0	no	yes	Papillary	1.6	NA	no	yes	NA	N1	3 on 41	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	7.6	pT3(m)N1aMx	left	EFO	EFO_0001658	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481876 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481876 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481876	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481876_1NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481876_sample_table.txt norm	GSM1481876_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	14.0	no	yes	Papillary	1.6	NA	no	yes	NA	N1	3 on 41	7.6	pT3(m)N1aMx	left	EFO	EFO_0001658	yes
GSM1481875 1	5-PT-N1,Papillary thyroid carcinoma,N1	5-PT-N1,Papillary thyroid carcinoma,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	39.0	no	no	Follicular	NA	3.0	no	no	NA	N1	6 on 14	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3N1bMx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481875 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481875 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481875	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481875_19-81-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481875_sample_table.txt norm	GSM1481875_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	39.0	no	no	Follicular	NA	3.0	no	no	NA	N1	6 on 14	NA	pT3N1bMx	left	EFO	EFO_0001658	no
GSM1481874 1	4-NLN,Normal lymph node,N1	4-NLN,Normal lymph node,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	73.0	yes	yes	Papillary	NA	5.0	no	no	BRAFmut	N1	15 on 22	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT4aN1bMx	left	EFO	EFO_0001658	NA	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481874 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481874 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481874	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481874_18-76-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481874_sample_table.txt norm	GSM1481874_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	73.0	yes	yes	Papillary	NA	5.0	no	no	BRAFmut	N1	15 on 22	NA	pT4aN1bMx	left	EFO	EFO_0001658	NA
GSM1481873 1	4-LNM,Lymph node metastasis,N1	4-LNM,Lymph node metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	73.0	yes	yes	Papillary	NA	5.0	no	no	BRAFmut	N1	15 on 22	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT4aN1bMx	left	EFO	EFO_0001658	NA	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481873 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481873 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481873	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481873_17-77-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481873_sample_table.txt norm	GSM1481873_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	73.0	yes	yes	Papillary	NA	5.0	no	no	BRAFmut	N1	15 on 22	NA	pT4aN1bMx	left	EFO	EFO_0001658	NA
GSM1481872 1	4-PT-N1,Papillary thyroid carcinoma,N1	4-PT-N1,Papillary thyroid carcinoma,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	73.0	yes	yes	Papillary	NA	5.0	no	no	BRAFmut	N1	15 on 22	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT4aN1bMx	left	EFO	EFO_0001658	NA	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481872 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481872 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481872	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481872_16-78-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481872_sample_table.txt norm	GSM1481872_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	73.0	yes	yes	Papillary	NA	5.0	no	no	BRAFmut	N1	15 on 22	NA	pT4aN1bMx	left	EFO	EFO_0001658	NA
GSM1481871 1	11-LNM2,Lymph node metastasis,N1	11-LNM2,Lymph node metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	42.0	yes	yes	Papillary	3.0	1.0	yes	yes	BRAFmut	N1	22 on 51	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.7	pT3(m)N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481871 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481871 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481871	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481871_16-5M2PSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.3.zip	P-GSE60542-1	ArrayExpress	GSM1481871_sample_table.txt norm	GSM1481871_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	42.0	yes	yes	Papillary	3.0	1.0	yes	yes	BRAFmut	N1	22 on 51	9.7	pT3(m)N1bMx	both	  	  	no
GSM1481870 1	3-NLN,Normal lymph node,N1	3-NLN,Normal lymph node,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	25.0	yes	no	Papillary	2.5	2.2	no	yes	BRAFmut	N1	5 on 23	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT2(m)N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481870 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481870 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481870	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481870_15-74-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481870_sample_table.txt norm	GSM1481870_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	25.0	yes	no	Papillary	2.5	2.2	no	yes	BRAFmut	N1	5 on 23	NA	pT2(m)N1bMx	both	  	  	no
GSM1481869 1	11-LNM1,Lymph node metastasis,N1	11-LNM1,Lymph node metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	42.0	yes	yes	Papillary	3.0	1.0	yes	yes	BRAFmut	N1	22 on 51	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.7	pT3(m)N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481869 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481869 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481869	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481869_15-5M1PS.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481869_sample_table.txt norm	GSM1481869_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	42.0	yes	yes	Papillary	3.0	1.0	yes	yes	BRAFmut	N1	22 on 51	9.7	pT3(m)N1bMx	both	  	  	no
GSM1481868 1	29-PT-N0,Papillary thyroid carcinoma,N0	29-PT-N0,Papillary thyroid carcinoma,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	79.0	NA	no	Follicular	1.2	NA	no	no	RET-PTC1	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.0	pT1N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481868 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481868 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481868	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481868_140BoT_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481868_sample_table.txt norm	GSM1481868_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	79.0	NA	no	Follicular	1.2	NA	no	no	RET-PTC1	N0	NA	9.0	pT1N0Mx	right	EFO	EFO_0001659	no
GSM1481867 1	29-N,Normal thyroid,N0	29-N,Normal thyroid,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	79.0	NA	no	Follicular	1.2	NA	no	no	RET-PTC1	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.3	pT1N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481867 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481867 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481867	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481867_140BoN_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481867_sample_table.txt norm	GSM1481867_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	79.0	NA	no	Follicular	1.2	NA	no	no	RET-PTC1	N0	NA	8.3	pT1N0Mx	right	EFO	EFO_0001659	no
GSM1481866 1	3-LNM,Lymph node metastasis,N1	3-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	25.0	yes	no	Papillary	2.5	2.2	no	yes	BRAFmut	N1	5 on 23	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT2(m)N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481866 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481866 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481866	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481866_14-71-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481866_sample_table.txt norm	GSM1481866_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	25.0	yes	no	Papillary	2.5	2.2	no	yes	BRAFmut	N1	5 on 23	NA	pT2(m)N1bMx	both	  	  	no
GSM1481865 1	11-PT-N1,Papillary thyroid carcinoma,N1	11-PT-N1,Papillary thyroid carcinoma,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	42.0	yes	yes	Papillary	3.0	1.0	yes	yes	BRAFmut	N1	22 on 51	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.4	pT3(m)N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481865 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481865 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481865	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481865_14-5PTPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481865_sample_table.txt norm	GSM1481865_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	42.0	yes	yes	Papillary	3.0	1.0	yes	yes	BRAFmut	N1	22 on 51	9.4	pT3(m)N1bMx	both	  	  	no
GSM1481864 1	17-LNM,Lymph node metastasis,N1	17-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	65.0	yes	yes	Papillary	1.0	0.8	no	yes	BRAFmut	N1	1 on 6	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	7.0	pT3mN1aMx	both	  	  	yes	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481864 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481864 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481864	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481864_132Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481864_sample_table.txt norm	GSM1481864_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	65.0	yes	yes	Papillary	1.0	0.8	no	yes	BRAFmut	N1	1 on 6	7.0	pT3mN1aMx	both	  	  	yes
GSM1481863 1	28-PT-N0,Papillary thyroid carcinoma,N0	28-PT-N0,Papillary thyroid carcinoma,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	51.0	NA	no	Follicular	1.3	NA	yes	yes	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.1	pT1N0Mx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481863 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481863 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481863	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481863_130BoT_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481863_sample_table.txt norm	GSM1481863_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	51.0	NA	no	Follicular	1.3	NA	yes	yes	BRAFmut	N0	NA	9.1	pT1N0Mx	both	  	  	no
GSM1481862 1	28-N,Normal thyroid,N0	28-N,Normal thyroid,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	51.0	NA	no	Follicular	1.3	NA	yes	yes	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.8	pT1N0Mx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481862 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481862 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481862	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481862_130BoN_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481862_sample_table.txt norm	GSM1481862_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	51.0	NA	no	Follicular	1.3	NA	yes	yes	BRAFmut	N0	NA	8.8	pT1N0Mx	both	  	  	no
GSM1481861 1	3-PT-N1,Papillary thyroid carcinoma,N1	3-PT-N1,Papillary thyroid carcinoma,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	25.0	yes	no	Papillary	2.5	2.2	no	yes	BRAFmut	N1	5 on 23	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT2(m)N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481861 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481861 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481861	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481861_13-70-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481861_sample_table.txt norm	GSM1481861_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	25.0	yes	no	Papillary	2.5	2.2	no	yes	BRAFmut	N1	5 on 23	NA	pT2(m)N1bMx	both	  	  	no
GSM1481860 1	20-NLN,Normal lymph node,N0	20-NLN,Normal lymph node,N0	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	31.0	NA	NA	NA	NA	NA	NA	NA	NA	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT1(m)N0Mx	NA	  	  	NA	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481860 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481860 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481860	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481860_12-64-Bo-plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481860_sample_table.txt norm	GSM1481860_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	31.0	NA	NA	NA	NA	NA	NA	NA	NA	N0	NA	NA	pT1(m)N0Mx	NA	  	  	NA
GSM1481859 1	10-LNM,Lymph node metastasis,N1	10-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	37.0	yes	yes	Papillary	1.5	2.5	no	yes	NA	N1	20 on 46	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.4	pT3(m)N1bMx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481859 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481859 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481859	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481859_12-4MPS_3_Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481859_sample_table.txt norm	GSM1481859_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	37.0	yes	yes	Papillary	1.5	2.5	no	yes	NA	N1	20 on 46	8.4	pT3(m)N1bMx	left	EFO	EFO_0001658	no
GSM1481858 1	25-PT-N0,Papillary thyroid carcinoma,N0	25-PT-N0,Papillary thyroid carcinoma,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	39.0	NA	yes	Follicular	1.5	NA	yes	yes	RET-PTC1	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.6	pT3N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481858 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481858 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481858	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481858_12-13PTCPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481858_sample_table.txt norm	GSM1481858_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	39.0	NA	yes	Follicular	1.5	NA	yes	yes	RET-PTC1	N0	NA	8.6	pT3N0Mx	left	EFO	EFO_0001658	no
GSM1481857 1	19-LNM,Lymph node metastasis,N1	19-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	41.0	no	no	Papillary	1.5	NA	no	yes	NA	N1	1 on 6	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.8	pT1bN1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481857 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481857 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481857	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481857_111-Bo_HG-U133_Plus_2_2.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481857_sample_table.txt norm	GSM1481857_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	41.0	no	no	Papillary	1.5	NA	no	yes	NA	N1	1 on 6	8.8	pT1bN1bMx	both	  	  	no
GSM1481856 1	19-N2,Normal thyroid,N1	19-N2,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	41.0	no	no	Papillary	1.5	NA	no	yes	NA	N1	1 on 6	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.7	pT1bN1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481856 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481856 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481856	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481856_110-Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481856_sample_table.txt norm	GSM1481856_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	41.0	no	no	Papillary	1.5	NA	no	yes	NA	N1	1 on 6	8.7	pT1bN1bMx	both	  	  	no
GSM1481855 1	1a-LNM,Lymph node metastasis,N1	1a-LNM,Lymph node metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	35.0	yes	no	Papillary	5.0	4.0	no	no	RET-PTC1	N1	8 on 8	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3N1bMx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481855 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481855 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481855	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481855_11-patient-A-meta-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481855_sample_table.txt norm	GSM1481855_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	35.0	yes	no	Papillary	5.0	4.0	no	no	RET-PTC1	N1	8 on 8	NA	pT3N1bMx	left	EFO	EFO_0001658	no
GSM1481854 1	10-PT-N1,Papillary thyroid carcinoma,N1	10-PT-N1,Papillary thyroid carcinoma,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	37.0	yes	yes	Papillary	1.5	2.5	no	yes	NA	N1	20 on 46	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	7.8	pT3(m)N1bMx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481854 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481854 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481854	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481854_11-4PTPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481854_sample_table.txt norm	GSM1481854_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	37.0	yes	yes	Papillary	1.5	2.5	no	yes	NA	N1	20 on 46	7.8	pT3(m)N1bMx	left	EFO	EFO_0001658	no
GSM1481853 1	23a-PT-N0,Papillary thyroid carcinoma,N0	23a-PT-N0,Papillary thyroid carcinoma,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	52.0	NA	yes	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.5	pT3N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481853 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481853 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481853	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481853_11-22PTCPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481853_sample_table.txt norm	GSM1481853_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	52.0	NA	yes	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	8.5	pT3N0Mx	right	EFO	EFO_0001659	no
GSM1481852 1	25-N,Normal thyroid,N0	25-N,Normal thyroid,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	39.0	NA	yes	Follicular	1.5	NA	yes	yes	RET-PTC1	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.5	pT3N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481852 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481852 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481852	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481852_11-13NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481852_sample_table.txt norm	GSM1481852_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	39.0	NA	yes	Follicular	1.5	NA	yes	yes	RET-PTC1	N0	NA	8.5	pT3N0Mx	left	EFO	EFO_0001658	no
GSM1481851 1	19-N1,Normal thyroid,N1	19-N1,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	41.0	no	no	Papillary	1.5	NA	no	yes	NA	N1	1 on 6	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.5	pT1bN1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481851 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481851 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481851	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481851_109-Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481851_sample_table.txt norm	GSM1481851_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	41.0	no	no	Papillary	1.5	NA	no	yes	NA	N1	1 on 6	8.5	pT1bN1bMx	both	  	  	no
GSM1481850 1	13-LNM,Lymph node metastasis,N1	13-LNM,Lymph node metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	57.0	yes	yes	Papillary	3.5	3.0	no	yes	BRAFmut	N1	9 on 9	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.3	pT3N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481850 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481850 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481850	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481850_108-Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481850_sample_table.txt norm	GSM1481850_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	57.0	yes	yes	Papillary	3.5	3.0	no	yes	BRAFmut	N1	9 on 9	8.3	pT3N1bMx	both	  	  	no
GSM1481849 1	13-PT-N1,Papillary thyroid carcinoma,N1	13-PT-N1,Papillary thyroid carcinoma,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	57.0	yes	yes	Papillary	3.5	3.0	no	yes	BRAFmut	N1	9 on 9	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.0	pT3N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481849 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481849 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481849	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481849_107-Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481849_sample_table.txt norm	GSM1481849_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	57.0	yes	yes	Papillary	3.5	3.0	no	yes	BRAFmut	N1	9 on 9	9.0	pT3N1bMx	both	  	  	no
GSM1481848 1	13-N,Normal thyroid,N1	13-N,Normal thyroid,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	57.0	yes	yes	Papillary	3.5	3.0	no	yes	BRAFmut	N1	9 on 9	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	7.8	pT3N1bMx	both	  	  	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481848 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481848 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481848	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481848_106-Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481848_sample_table.txt norm	GSM1481848_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	IVA	57.0	yes	yes	Papillary	3.5	3.0	no	yes	BRAFmut	N1	9 on 9	7.8	pT3N1bMx	both	  	  	no
GSM1481847 1	12-LNM,Lymph node metastasis,N1	12-LNM,Lymph node metastasis,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	26.0	no	no	Papillary	1.4	0.3	no	no	NA	N1	4 on 8	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.9	pT1N1bMx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481847 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481847 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481847	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481847_105-Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481847_sample_table.txt norm	GSM1481847_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	26.0	no	no	Papillary	1.4	0.3	no	no	NA	N1	4 on 8	8.9	pT1N1bMx	right	EFO	EFO_0001659	no
GSM1481846 1	12-PT-N1,Papillary thyroid carcinoma,N1	12-PT-N1,Papillary thyroid carcinoma,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	26.0	no	no	Papillary	1.4	0.3	no	no	NA	N1	4 on 8	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.7	pT1N1bMx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481846 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481846 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481846	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481846_104-Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.4.zip	P-GSE60542-1	ArrayExpress	GSM1481846_sample_table.txt norm	GSM1481846_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	26.0	no	no	Papillary	1.4	0.3	no	no	NA	N1	4 on 8	8.7	pT1N1bMx	right	EFO	EFO_0001659	no
GSM1481845 1	12-N,Normal thyroid,N1	12-N,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	26.0	no	no	Papillary	1.4	0.3	no	no	NA	N1	4 on 8	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.5	pT1N1bMx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481845 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481845 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481845	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481845_103-Bo_HG-U133_Plus_2_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.5.zip	P-GSE60542-1	ArrayExpress	GSM1481845_sample_table.txt norm	GSM1481845_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	26.0	no	no	Papillary	1.4	0.3	no	no	NA	N1	4 on 8	8.5	pT1N1bMx	right	EFO	EFO_0001659	no
GSM1481844 1	1a-PT-N1,Papillary thyroid carcinoma,N1	1a-PT-N1,Papillary thyroid carcinoma,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	35.0	yes	no	Papillary	5.0	4.0	no	no	RET-PTC1	N1	8 on 8	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3N1bMx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481844 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481844 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481844	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481844_10-patient-A-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.5.zip	P-GSE60542-1	ArrayExpress	GSM1481844_sample_table.txt norm	GSM1481844_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	35.0	yes	no	Papillary	5.0	4.0	no	no	RET-PTC1	N1	8 on 8	NA	pT3N1bMx	left	EFO	EFO_0001658	no
GSM1481843 1	10-N,Normal thyroid,N1	10-N,Normal thyroid,N1	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	37.0	yes	yes	Papillary	1.5	2.5	no	yes	NA	N1	20 on 46	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.3	pT3(m)N1bMx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481843 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481843 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481843	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481843_10-4NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.5.zip	P-GSE60542-1	ArrayExpress	GSM1481843_sample_table.txt norm	GSM1481843_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	37.0	yes	yes	Papillary	1.5	2.5	no	yes	NA	N1	20 on 46	8.3	pT3(m)N1bMx	left	EFO	EFO_0001658	no
GSM1481842 1	23a-N,Normal thyroid,N0	23a-N,Normal thyroid,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	52.0	NA	yes	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.0	pT3N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481842 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481842 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481842	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481842_10-22NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.5.zip	P-GSE60542-1	ArrayExpress	GSM1481842_sample_table.txt norm	GSM1481842_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	52.0	NA	yes	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	8.0	pT3N0Mx	right	EFO	EFO_0001659	no
GSM1481841 1	24-PT-N0,Papillary thyroid carcinoma,N0	24-PT-N0,Papillary thyroid carcinoma,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	29.0	NA	no	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.1	pT1N0Mx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481841 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481841 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481841	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481841_10-12PTCPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.5.zip	P-GSE60542-1	ArrayExpress	GSM1481841_sample_table.txt norm	GSM1481841_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	I	29.0	NA	no	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	9.1	pT1N0Mx	left	EFO	EFO_0001658	no
GSM1481840 1	9-LNM,Lymph node metastasis,N1	9-LNM,Lymph node metastasis,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	43.0	yes	no	Papillary	1.5	2.0	no	no	NA	N1	4 on 22	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	9.4	pT1N1bMx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481840 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481840 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481840	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481840_1-3MPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.5.zip	P-GSE60542-1	ArrayExpress	GSM1481840_sample_table.txt norm	GSM1481840_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	43.0	yes	no	Papillary	1.5	2.0	no	no	NA	N1	4 on 22	9.4	pT1N1bMx	right	EFO	EFO_0001659	no
GSM1481839 1	1-PT-N1,Papillary thyroid carcinoma,N1	1-PT-N1,Papillary thyroid carcinoma,N1	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	35.0	yes	no	Papillary	5.0	4.0	no	no	RET-PTC1	N1	8 on 8	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	NA	pT3N1bMx	left	EFO	EFO_0001658	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481839 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481839 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481839	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481839_1-22a-Bo-Plus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.5.zip	P-GSE60542-1	ArrayExpress	GSM1481839_sample_table.txt norm	GSM1481839_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	male	EFO	http://purl.org/obo/owl/PATO#PATO_0000384	I	35.0	yes	no	Papillary	5.0	4.0	no	no	RET-PTC1	N1	8 on 8	NA	pT3N1bMx	left	EFO	EFO_0001658	no
GSM1481838 1	23-N,Normal thyroid,N0	23-N,Normal thyroid,N0	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	52.0	NA	yes	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	8.1	pT3N0Mx	right	EFO	EFO_0001659	no	P-GSE60542-2	ArrayExpress	P-GSE60542-3	ArrayExpress	GSM1481838 extract 1	total RNA	P-GSE60542-4	ArrayExpress	GSM1481838 LE 1	biotin	P-GSE60542-5	ArrayExpress	GSM1481838	A-AFFY-44	ArrayExpress	array assay	P-GSE60542-6	ArrayExpress	GSM1481838_1-11NPSPlus.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.raw.5.zip	P-GSE60542-1	ArrayExpress	GSM1481838_sample_table.txt norm	GSM1481838_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-60542/E-GEOD-60542.processed.1.zip	female	EFO	http://purl.org/obo/owl/PATO#PATO_0000383	III	52.0	NA	yes	Trabecular	1.5	NA	no	no	BRAFmut	N0	NA	8.1	pT3N0Mx	right	EFO	EFO_0001659	no
